Negative cofitness for GFF104 from Variovorax sp. SCN45

General secretion pathway protein D
SEED: General secretion pathway protein D
KEGG: general secretion pathway protein D

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF710 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) -0.51
2 GFF3931 Protein sirB1 -0.49
3 GFF4372 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) -0.49
4 GFF7361 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) -0.48
5 GFF669 BUG/TctC family periplasmic protein -0.47
6 GFF6776 Maltodextrin ABC transporter, permease protein MdxG -0.47
7 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) -0.47
8 GFF5294 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC -0.46
9 GFF6801 Transcriptional regulator, GntR family -0.46
10 GFF4928 hypothetical protein -0.45
11 GFF4892 FIG00715976: hypothetical protein -0.45
12 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.45
13 GFF2163 hypothetical protein -0.45
14 GFF1506 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.45
15 GFF1706 ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) / ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.44
16 GFF1318 hypothetical protein -0.44
17 GFF3851 Uncharacterized MFS-type transporter -0.44
18 GFF4568 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) -0.44
19 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) -0.44
20 GFF975 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9) -0.44

Or look for positive cofitness