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  • Negative cofitness for GFF1011 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Transcriptional regulatory protein levR
    SEED: Transcriptional regulatory protein levR

    Computing cofitness values with 79 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3090 Putative xylanase -0.57
    2 GFF340 autotransporter -0.56
    3 GFF4090 Periplasmic fimbrial chaperone protein -0.56
    4 GFF467 type 1 fimbriae anchoring protein FimD -0.56
    5 GFF2299 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) -0.52
    6 GFF1437 T1SS secreted agglutinin RTX -0.51
    7 GFF4074 ClpB protein -0.49
    8 GFF3735 Secreted effector protein -0.48
    9 GFF1619 Copper resistance protein D -0.48
    10 GFF1337 FIG01045819: hypothetical protein -0.46
    11 GFF4091 FIG034929: Fimbriae usher protein SafC -0.46
    12 GFF966 putative cytoplasmic protein -0.46
    13 GFF3928 Propionate kinase, propanediol utilization (EC 2.7.2.1) -0.45
    14 GFF4738 Type III secretion system protein -0.45
    15 GFF4459 Mobile element protein -0.45
    16 GFF435 3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130) -0.45
    17 GFF3763 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family -0.45
    18 GFF4428 Allantoinase (EC 3.5.2.5) -0.45
    19 GFF1439 YjcB protein -0.45
    20 GFF412 Peptide transport system permease protein sapB (TC 3.A.1.5.5) -0.44

    Or look for positive cofitness