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  • Negative cofitness for PS417_05080 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator
    KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_21275 GntR family transcriptional regulator -0.19
    2 PS417_13840 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) -0.19
    3 PS417_00920 diguanylate cyclase -0.19
    4 PS417_02750 alpha/beta hydrolase -0.18
    5 PS417_01470 cell division protein FtsQ -0.18
    6 PS417_21240 hypothetical protein -0.17
    7 PS417_21180 short-chain dehydrogenase -0.17
    8 PS417_01335 hypothetical protein -0.16
    9 PS417_20195 sodium:solute symporter -0.16
    10 PS417_05435 diguanylate cyclase -0.16
    11 PS417_23465 flavodoxin -0.16
    12 PS417_04540 long-chain fatty acid--CoA ligase -0.16
    13 PS417_03045 hypothetical protein -0.16
    14 PS417_19490 mechanosensitive ion channel protein -0.16
    15 PS417_27045 ATPase -0.16
    16 PS417_17770 ABC transporter permease -0.16
    17 PS417_01880 poly(3-hydroxyalkanoate) granule-associated protein PhaI -0.16
    18 PS417_19310 MFS transporter -0.15
    19 PS417_20035 adenosylcobinamide kinase -0.15
    20 PS417_12260 hypothetical protein -0.15

    Or look for positive cofitness