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  • Negative cofitness for Echvi_3473 from Echinicola vietnamensis KMM 6221, DSM 17526

    Tetratricopeptide repeat.
    SEED: TPR domain protein, putative component of TonB system

    Computing cofitness values with 221 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Echvi_4509 Zn-dependent hydrolases, including glyoxylases -0.27
    2 Echvi_1942 Bacteroides conjugative transposon TraK protein -0.26
    3 Echvi_4115 Nitrogen regulatory protein PII -0.26
    4 Echvi_2800 hypothetical protein -0.25
    5 Echvi_0175 hypothetical protein -0.25
    6 Echvi_3709 ribonuclease Z -0.24
    7 Echvi_1346 hypothetical protein -0.24
    8 Echvi_0502 Galactose mutarotase and related enzymes -0.24
    9 Echvi_1651 SusD family. -0.24
    10 Echvi_3523 Metal-dependent hydrolase -0.23
    11 Echvi_3084 SusD family. -0.23
    12 Echvi_4008 hypothetical protein -0.23
    13 Echvi_1401 Outer membrane protein -0.23
    14 Echvi_3738 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) -0.23
    15 Echvi_3513 Predicted P-loop ATPase and inactivated derivatives -0.23
    16 Echvi_1185 hypothetical protein -0.23
    17 Echvi_2815 Predicted membrane protein -0.22
    18 Echvi_3665 Bacteroidetes-specific putative membrane protein -0.22
    19 Echvi_3666 conserved repeat domain -0.22
    20 Echvi_2755 Beta-lactamase class C and other penicillin binding proteins -0.22

    Or look for positive cofitness