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  • Negative cofitness for Echvi_1256 from Echinicola vietnamensis KMM 6221, DSM 17526

    Predicted transcriptional regulators
    SEED: Transcriptional regulator, MerR family

    Computing cofitness values with 221 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Echvi_1636 SusD family. -0.54
    2 Echvi_1230 TonB-linked outer membrane protein, SusC/RagA family -0.53
    3 Echvi_2816 Glycine/D-amino acid oxidases (deaminating) -0.51
    4 Echvi_3950 Glycine/D-amino acid oxidases (deaminating) -0.51
    5 Echvi_2817 Na+/H+ antiporter NhaC -0.51
    6 Echvi_1199 Methyltransferase domain. -0.50
    7 Echvi_0471 Bacterial regulatory proteins, tetR family. -0.49
    8 Echvi_1580 Choline dehydrogenase and related flavoproteins -0.49
    9 Echvi_0339 Tetratricopeptide repeat. -0.48
    10 Echvi_3726 DNA-binding ferritin-like protein (oxidative damage protectant) -0.48
    11 Echvi_3910 Transcriptional regulator/sugar kinase -0.48
    12 Echvi_0009 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase -0.46
    13 Echvi_1747 amino acid carrier protein -0.45
    14 Echvi_0535 NAD-dependent aldehyde dehydrogenases -0.44
    15 Echvi_0584 peptide chain release factor 3 -0.44
    16 Echvi_1748 hypothetical protein -0.44
    17 Echvi_3911 alpha-1,2-mannosidase, putative -0.43
    18 Echvi_2193 Transcriptional regulators -0.43
    19 Echvi_0642 pseudouridine synthase, RluA family -0.42
    20 Echvi_0636 anti-anti-sigma factor -0.42

    Or look for positive cofitness