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  • Negative cofitness for DZA65_RS20940 from Dickeya dianthicola ME23

    cold-shock protein
    SEED: Cold shock protein CspG
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS17540 YbdD/YjiX family protein -0.45
    2 DZA65_RS15520 tRNA-Arg -0.44
    3 DZA65_RS16135 TfoX/Sxy family DNA transformation protein -0.44
    4 DZA65_RS06895 Tol-Pal system protein TolQ -0.43
    5 DZA65_RS19735 ABC transporter permease -0.41
    6 DZA65_RS15340 colicin V production protein -0.41
    7 DZA65_RS00810 putative lipopolysaccharide heptosyltransferase III -0.41
    8 DZA65_RS04190 hypothetical protein -0.41
    9 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF -0.40
    10 DZA65_RS10410 GPW/gp25 family protein -0.38
    11 DZA65_RS19750 hypothetical protein -0.38
    12 DZA65_RS03055 FAD:protein FMN transferase -0.38
    13 DZA65_RS12450 respiratory nitrate reductase subunit gamma -0.38
    14 DZA65_RS19970 Fe-S cluster assembly protein NifU -0.38
    15 DZA65_RS19740 ABC transporter ATP-binding protein -0.38
    16 DZA65_RS07110 dTDP-glucose 4,6-dehydratase -0.37
    17 DZA65_RS19720 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase -0.37
    18 DZA65_RS19745 GDP-L-fucose synthase -0.37
    19 DZA65_RS18650 alanine racemase -0.37
    20 DZA65_RS12170 type III secretion inner membrane ring lipoprotein SctJ -0.37

    Or look for positive cofitness