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  • Negative cofitness for DZA65_RS18690 from Dickeya dianthicola ME23

    type I-F CRISPR-associated endoribonuclease Cas6/Csy4
    SEED: CRISPR-associated protein, Csy4 family

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS04595 efflux RND transporter permease subunit -0.57
    2 DZA65_RS09055 ABC transporter permease -0.56
    3 DZA65_RS02485 DNA repair protein RadA -0.52
    4 DZA65_RS15180 regulatory protein GemA -0.51
    5 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA -0.51
    6 DZA65_RS07950 phosphonate metabolism transcriptional regulator PhnF -0.51
    7 DZA65_RS22985 hypothetical protein -0.50
    8 DZA65_RS20190 fumarate reductase subunit FrdC -0.50
    9 DZA65_RS03735 ATP-binding cassette domain-containing protein -0.48
    10 DZA65_RS06325 nicotinamide mononucleotide deamidase-related protein YfaY -0.47
    11 DZA65_RS05015 TIGR03745 family integrating conjugative element membrane protein -0.47
    12 DZA65_RS02575 DUF1868 domain-containing protein -0.47
    13 DZA65_RS08790 alpha/beta hydrolase -0.46
    14 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF -0.46
    15 DZA65_RS15535 avirulence protein -0.46
    16 DZA65_RS03775 MarR family transcriptional regulator -0.46
    17 DZA65_RS15445 YfcL family protein -0.45
    18 DZA65_RS07995 phosphonate metabolism protein PhnP -0.45
    19 DZA65_RS11495 AvrE-family type 3 secretion system effector -0.45
    20 DZA65_RS00395 VfmB protein -0.45

    Or look for positive cofitness