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  • Negative cofitness for DZA65_RS17565 from Dickeya dianthicola ME23

    M20 family metallopeptidase
    SEED: Acetylornithine deacetylase (EC 3.5.1.16)
    KEGG: succinyl-diaminopimelate desuccinylase

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS20770 DNA uptake porin HofQ -0.51
    2 DZA65_RS07010 molybdate ABC transporter substrate-binding protein -0.50
    3 DZA65_RS12465 nitrate reductase subunit alpha -0.49
    4 DZA65_RS00015 DNA replication/repair protein RecF -0.46
    5 DZA65_RS08190 LacI family DNA-binding transcriptional regulator -0.46
    6 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC -0.46
    7 DZA65_RS22890 hypothetical protein -0.45
    8 DZA65_RS12730 ABC transporter permease subunit -0.44
    9 DZA65_RS03895 myo-inosose-2 dehydratase -0.44
    10 DZA65_RS08925 molybdopterin-synthase adenylyltransferase MoeB -0.44
    11 DZA65_RS21935 two-component system sensor histidine kinase DcuS -0.44
    12 DZA65_RS08930 molybdopterin molybdotransferase MoeA -0.44
    13 DZA65_RS11845 EAL domain-containing protein -0.44
    14 DZA65_RS02375 HD domain-containing protein -0.44
    15 DZA65_RS09010 cyclic pyranopterin monophosphate synthase MoaC -0.44
    16 DZA65_RS05430 flavodoxin -0.43
    17 DZA65_RS20995 pirin family protein -0.43
    18 DZA65_RS05835 proline-specific permease ProY -0.43
    19 DZA65_RS12485 nitrate/nitrite two-component system sensor histidine kinase NarX -0.43
    20 DZA65_RS03265 protein YrbN -0.43

    Or look for positive cofitness