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  • Negative cofitness for DZA65_RS16865 from Dickeya dianthicola ME23

    sensor domain-containing diguanylate cyclase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS11845 EAL domain-containing protein -0.63
    2 DZA65_RS16870 cyclic-guanylate-specific phosphodiesterase -0.62
    3 DZA65_RS13530 transcription-repair coupling factor -0.58
    4 DZA65_RS17710 YfiR family protein -0.56
    5 DZA65_RS02750 hypothetical protein -0.56
    6 DZA65_RS19310 RNA polymerase-associated protein RapA -0.56
    7 DZA65_RS14025 flagella synthesis chaperone protein FlgN -0.56
    8 DZA65_RS13870 flagellin -0.55
    9 DZA65_RS15645 type II secretion system minor pseudopilin GspK -0.55
    10 DZA65_RS16335 DNA cytosine methyltransferase -0.55
    11 DZA65_RS02720 polysaccharide biosynthesis tyrosine autokinase -0.54
    12 DZA65_RS13865 methyltransferase -0.54
    13 DZA65_RS05835 proline-specific permease ProY -0.54
    14 DZA65_RS14085 flagellar motor stator protein MotA -0.53
    15 DZA65_RS13970 flagellar assembly peptidoglycan hydrolase FlgJ -0.53
    16 DZA65_RS11260 hypothetical protein -0.53
    17 DZA65_RS12820 PAS domain-containing protein -0.53
    18 DZA65_RS13965 flagellar hook-associated protein FlgK -0.53
    19 DZA65_RS13835 RNA polymerase sigma factor FliA -0.53
    20 DZA65_RS14070 chemotaxis protein CheW -0.53

    Or look for positive cofitness