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  • Negative cofitness for DZA65_RS12470 from Dickeya dianthicola ME23

    LysR family transcriptional regulator
    SEED: LysR-family transcriptional regulator clustered with PA0057

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS00705 ABC transporter ATP-binding protein -0.42
    2 DZA65_RS12605 phage tail protein I -0.40
    3 DZA65_RS04115 DUF2586 domain-containing protein -0.37
    4 DZA65_RS09780 30S ribosomal protein S6--L-glutamate ligase -0.36
    5 DZA65_RS03290 SCP2 domain-containing protein -0.36
    6 DZA65_RS09385 glycoside hydrolase family 3 protein -0.35
    7 DZA65_RS12675 tail assembly protein -0.35
    8 DZA65_RS21690 chemotaxis protein -0.34
    9 DZA65_RS22175 AsmA family protein -0.34
    10 DZA65_RS10820 patatin-like phospholipase RssA -0.34
    11 DZA65_RS16845 N-acetylmuramic acid 6-phosphate etherase -0.33
    12 DZA65_RS18295 outer membrane protein assembly factor -0.33
    13 DZA65_RS02910 glutathione S-transferase family protein -0.33
    14 DZA65_RS08465 metal ABC transporter permease -0.33
    15 DZA65_RS08540 type VI secretion system contractile sheath small subunit -0.33
    16 DZA65_RS14735 NAD(P)H-dependent oxidoreductase -0.32
    17 DZA65_RS14550 alpha/beta hydrolase -0.32
    18 DZA65_RS00585 membrane dipeptidase -0.32
    19 DZA65_RS07200 YjbH domain-containing protein -0.32
    20 DZA65_RS08295 Tat pathway signal sequence domain protein -0.32

    Or look for positive cofitness