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  • Negative cofitness for DZA65_RS11720 from Dickeya dianthicola ME23

    2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
    SEED: 5-keto-D-gluconate 5-reductase (EC 1.1.1.69)
    KEGG: 2-deoxy-D-gluconate 3-dehydrogenase

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS03145 putative DNA-binding transcriptional regulator -0.70
    2 DZA65_RS02805 helix-turn-helix transcriptional regulator -0.70
    3 DZA65_RS04780 hypothetical protein -0.66
    4 DZA65_RS16330 restriction endonuclease -0.64
    5 DZA65_RS04305 cytosine permease -0.63
    6 DZA65_RS04300 LuxR family transcriptional regulator -0.62
    7 DZA65_RS22980 hypothetical protein -0.57
    8 DZA65_RS17900 transcriptional repressor MprA -0.57
    9 DZA65_RS11060 rhamnogalacturonate lyase -0.56
    10 DZA65_RS13440 porin -0.56
    11 DZA65_RS07035 hypothetical protein -0.56
    12 DZA65_RS09035 ABC transporter ATP-binding protein -0.55
    13 DZA65_RS13735 rhodanese-related sulfurtransferase -0.55
    14 DZA65_RS00410 helix-turn-helix transcriptional regulator -0.54
    15 DZA65_RS00430 histidine kinase -0.54
    16 DZA65_RS04310 Dyp-type peroxidase -0.54
    17 DZA65_RS13105 transcriptional regulator SlyA -0.54
    18 DZA65_RS14400 type IV secretion system protein -0.53
    19 DZA65_RS14230 KR domain-containing protein -0.53
    20 DZA65_RS13545 arylamine N-acetyltransferase -0.52

    Or look for positive cofitness