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  • Negative cofitness for DZA65_RS10285 from Dickeya dianthicola ME23

    LysR family transcriptional regulator
    SEED: Transcriptional regulator in custer with plant-induced nitrilase

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS14400 type IV secretion system protein -0.56
    2 DZA65_RS20810 GMP/IMP nucleotidase -0.52
    3 DZA65_RS15300 GSH-dependent disulfide bond oxidoreductase -0.50
    4 DZA65_RS15025 DUF2313 domain-containing protein -0.49
    5 DZA65_RS06395 galactose/methyl galactoside ABC transporter ATP-binding protein MglA -0.47
    6 DZA65_RS05385 cysteine desulfurase CsdA -0.47
    7 DZA65_RS02745 glycosyltransferase family 4 protein -0.46
    8 DZA65_RS06195 hypothetical protein -0.46
    9 DZA65_RS11185 acyltransferase family protein -0.45
    10 DZA65_RS21690 chemotaxis protein -0.45
    11 DZA65_RS19255 thiamine/thiamine pyrophosphate ABC transporter permease ThiP -0.45
    12 DZA65_RS18195 PAS domain-containing protein -0.44
    13 DZA65_RS04545 helix-turn-helix transcriptional regulator -0.44
    14 DZA65_RS07455 IS3 family transposase -0.43
    15 DZA65_RS00985 3'-5' ssDNA/RNA exonuclease TatD -0.43
    16 DZA65_RS16105 CoA-binding protein -0.43
    17 DZA65_RS01300 amino acid ABC transporter substrate-binding protein -0.43
    18 DZA65_RS11780 drug/metabolite DMT transporter permease -0.42
    19 DZA65_RS22655 MBL fold metallo-hydrolase -0.42
    20 DZA65_RS06150 adenine phosphoribosyltransferase -0.42

    Or look for positive cofitness