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  • Negative cofitness for DZA65_RS10080 from Dickeya dianthicola ME23

    response regulator
    SEED: Transcriptional regulatory protein CitB, DpiA
    KEGG: two-component system, CitB family, response regulator CitB

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS02425 ABC transporter permease -0.45
    2 DZA65_RS13810 HAMP domain-containing protein -0.42
    3 DZA65_RS22860 hypothetical protein -0.41
    4 DZA65_RS04205 zinc ribbon domain-containing protein -0.40
    5 DZA65_RS15305 TIGR01777 family protein -0.40
    6 DZA65_RS12305 amino acid ABC transporter permease -0.39
    7 DZA65_RS09360 hypothetical protein -0.39
    8 DZA65_RS18520 FCD domain-containing protein -0.39
    9 DZA65_RS21840 transposase -0.38
    10 DZA65_RS15595 (2,3-dihydroxybenzoyl)adenylate synthase -0.38
    11 DZA65_RS21560 alkaline phosphatase -0.38
    12 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO -0.37
    13 DZA65_RS18220 hypothetical protein -0.37
    14 DZA65_RS18190 galactarate dehydratase -0.37
    15 DZA65_RS19535 HAMP domain-containing protein -0.37
    16 DZA65_RS16290 general secretion pathway protein GspI -0.35
    17 DZA65_RS21925 2-hydroxycarboxylate transporter family protein -0.35
    18 DZA65_RS00655 ABC transporter ATP-binding protein -0.34
    19 DZA65_RS01925 proteasome-type protease -0.34
    20 DZA65_RS10895 HAMP domain-containing protein -0.34

    Or look for positive cofitness