• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for DZA65_RS08705 from Dickeya dianthicola ME23

    ABC transporter permease subunit
    SEED: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
    KEGG: peptide/nickel transport system permease protein

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS11760 metal-dependent hydrolase -0.47
    2 DZA65_RS13445 porin -0.42
    3 DZA65_RS12920 MFS transporter -0.41
    4 DZA65_RS00045 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ -0.41
    5 DZA65_RS00105 formyl-CoA transferase -0.40
    6 DZA65_RS08855 hypothetical protein -0.40
    7 DZA65_RS16320 DUF4337 domain-containing protein -0.40
    8 DZA65_RS19865 amino acid ABC transporter permease -0.40
    9 DZA65_RS15920 SDR family NAD(P)-dependent oxidoreductase -0.39
    10 DZA65_RS09070 secretion protein HlyD -0.38
    11 DZA65_RS02415 ABC transporter ATP-binding protein -0.38
    12 DZA65_RS22785 hypothetical protein -0.38
    13 DZA65_RS04570 NAD-dependent epimerase/dehydratase family protein -0.38
    14 DZA65_RS19020 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD -0.37
    15 DZA65_RS12280 transporter substrate-binding domain-containing protein -0.37
    16 DZA65_RS08625 GGDEF domain-containing protein -0.36
    17 DZA65_RS22525 hypothetical protein -0.36
    18 DZA65_RS09805 putrescine ABC transporter permease PotI -0.36
    19 DZA65_RS02160 hypothetical protein -0.36
    20 DZA65_RS13470 YdiU family protein -0.36

    Or look for positive cofitness