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  • Negative cofitness for DZA65_RS08085 from Dickeya dianthicola ME23

    type III PLP-dependent enzyme
    SEED: Achromobactin biosynthesis protein AcsE, Orn/DAP/Arg decarboxylase family
    KEGG: diaminopimelate decarboxylase

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS20590 AraC family transcriptional regulator -0.46
    2 DZA65_RS20515 bacterioferritin -0.44
    3 DZA65_RS11145 ROK family transcriptional regulator -0.42
    4 DZA65_RS12315 aminotransferase class IV -0.42
    5 DZA65_RS07025 pyridoxal phosphatase -0.41
    6 DZA65_RS09110 ABC transporter substrate-binding protein -0.40
    7 DZA65_RS20975 hypothetical protein -0.38
    8 DZA65_RS10630 response regulator -0.38
    9 DZA65_RS07525 IS481 family transposase -0.38
    10 DZA65_RS09915 leucine-responsive transcriptional regulator Lrp -0.38
    11 DZA65_RS10540 zinc ABC transporter ATP-binding protein ZnuC -0.38
    12 DZA65_RS10215 envelope biogenesis factor ElyC -0.37
    13 DZA65_RS06975 galactose-1-epimerase -0.36
    14 DZA65_RS12155 lytic murein transglycosylase -0.36
    15 DZA65_RS14250 poly(3-hydroxyalkanoate) depolymerase -0.36
    16 DZA65_RS20000 HipA domain-containing protein -0.36
    17 DZA65_RS06275 transcriptional regulator RcsB -0.36
    18 DZA65_RS14290 UvrY/SirA/GacA family response regulator transcription factor -0.35
    19 DZA65_RS02765 ATPase AAA -0.35
    20 DZA65_RS02485 DNA repair protein RadA -0.35

    Or look for positive cofitness