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  • Negative cofitness for DZA65_RS06960 from Dickeya dianthicola ME23

    3-deoxy-7-phosphoheptulonate synthase AroG
    SEED: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)
    KEGG: 3-deoxy-7-phosphoheptulonate synthase

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA -0.53
    2 DZA65_RS19920 nif-specific transcriptional activator NifA -0.50
    3 DZA65_RS07225 proline iminopeptidase-family hydrolase -0.50
    4 DZA65_RS12515 GAF domain-containing protein -0.49
    5 DZA65_RS04815 hypothetical protein -0.47
    6 DZA65_RS07920 anaerobic C4-dicarboxylate transporter -0.45
    7 DZA65_RS08425 malonate decarboxylase acyl carrier protein -0.45
    8 DZA65_RS03410 tRNA-Leu -0.44
    9 DZA65_RS03515 tRNA-Gly -0.44
    10 DZA65_RS22165 uracil-xanthine permease -0.44
    11 DZA65_RS04625 IS4 family transposase -0.43
    12 DZA65_RS09240 biotin carboxyl carrier domain-containing protein -0.43
    13 DZA65_RS22775 hypothetical protein -0.43
    14 DZA65_RS06550 endolytic peptidoglycan transglycosylase RlpA -0.42
    15 DZA65_RS18575 ABC transporter permease subunit -0.42
    16 DZA65_RS20190 fumarate reductase subunit FrdC -0.41
    17 DZA65_RS18530 glycoside hydrolase family 1 protein -0.41
    18 DZA65_RS03290 SCP2 domain-containing protein -0.40
    19 DZA65_RS01765 2,5-didehydrogluconate reductase DkgA -0.40
    20 DZA65_RS17085 serine endoprotease DegP -0.40

    Or look for positive cofitness