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  • Negative cofitness for DZA65_RS06290 from Dickeya dianthicola ME23

    isochorismate synthase MenF
    SEED: Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
    KEGG: menaquinone-specific isochorismate synthase

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS06785 YbfA family protein -0.50
    2 DZA65_RS13615 PTS glucose transporter subunit IIBC -0.45
    3 DZA65_RS21425 TonB-dependent vitamin B12 receptor BtuB -0.45
    4 DZA65_RS11370 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta -0.44
    5 DZA65_RS02280 FGGY-family carbohydrate kinase -0.44
    6 DZA65_RS03260 lipoprotein NlpI -0.42
    7 DZA65_RS07415 glutaredoxin-dependent arsenate reductase -0.41
    8 DZA65_RS14445 hypothetical protein -0.39
    9 DZA65_RS16285 type II secretion system major pseudopilin GspG -0.39
    10 DZA65_RS10015 amidohydrolase -0.39
    11 DZA65_RS17145 polynucleotide adenylyltransferase PcnB -0.38
    12 DZA65_RS12740 transporter -0.37
    13 DZA65_RS08760 IS3 family transposase -0.37
    14 DZA65_RS07650 AIPR family protein -0.36
    15 DZA65_RS20970 gluconate operon transcriptional repressor GntR -0.36
    16 DZA65_RS05755 alpha/beta fold hydrolase -0.36
    17 DZA65_RS15095 head protein -0.36
    18 DZA65_RS10890 cardiolipin synthase -0.35
    19 DZA65_RS18485 glycoside hydrolase family 1 protein -0.35
    20 DZA65_RS11930 type I toxin-antitoxin system SymE family toxin -0.35

    Or look for positive cofitness