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  • Negative cofitness for DZA65_RS05930 from Dickeya dianthicola ME23

    tRNA 4-thiouridine(8) synthase ThiI
    SEED: Thiamine biosynthesis protein thiI
    KEGG: thiamine biosynthesis protein ThiI

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS05770 shikimate kinase AroL -0.43
    2 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -0.42
    3 DZA65_RS08220 hypothetical protein -0.42
    4 DZA65_RS12215 type III secretion system inner membrane ring subunit SctD -0.41
    5 DZA65_RS17885 glycine betaine/L-proline ABC transporter substrate-binding protein ProX -0.40
    6 DZA65_RS16995 HD domain-containing protein -0.40
    7 DZA65_RS09595 amino acid permease -0.39
    8 DZA65_RS15615 alkene reductase -0.39
    9 DZA65_RS16810 nitrogen regulatory protein P-II -0.39
    10 DZA65_RS02835 protein-disulfide reductase DsbD -0.39
    11 DZA65_RS06890 tol-pal system-associated acyl-CoA thioesterase -0.39
    12 DZA65_RS05280 TerC family protein -0.37
    13 DZA65_RS08485 TetR/AcrR family transcriptional regulator -0.37
    14 DZA65_RS01995 DUF29 domain-containing protein -0.37
    15 DZA65_RS16055 DUF2633 family protein -0.37
    16 DZA65_RS04870 DUF3577 domain-containing protein -0.36
    17 DZA65_RS02385 chemotaxis protein -0.36
    18 DZA65_RS14795 multidrug effflux MFS transporter -0.36
    19 DZA65_RS10270 ribonuclease T2 -0.36
    20 DZA65_RS08015 phosphonate ABC transporter ATP-binding protein -0.36

    Or look for positive cofitness