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  • Negative cofitness for DZA65_RS05425 from Dickeya dianthicola ME23

    tRNA pseudouridine(65) synthase TruC
    SEED: tRNA pseudouridine synthase C (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase C

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS00210 sulfite exporter TauE/SafE family protein -0.55
    2 DZA65_RS03370 type I restriction endonuclease subunit R -0.51
    3 DZA65_RS02105 AAA family ATPase -0.50
    4 DZA65_RS21365 YifB family Mg chelatase-like AAA ATPase -0.49
    5 DZA65_RS19295 hypothetical protein -0.49
    6 DZA65_RS18570 ABC transporter permease -0.49
    7 DZA65_RS14305 D-serine/D-alanine/glycine transporter -0.48
    8 DZA65_RS01715 ADP-ribose diphosphatase -0.46
    9 DZA65_RS17565 M20 family metallopeptidase -0.46
    10 DZA65_RS03960 DNA primase -0.46
    11 DZA65_RS19465 transaldolase -0.45
    12 DZA65_RS19375 LysE family transporter -0.45
    13 DZA65_RS09215 outer membrane protein OmpX -0.44
    14 DZA65_RS10770 asparaginase -0.44
    15 DZA65_RS12300 amino acid ABC transporter permease -0.41
    16 DZA65_RS13370 ABC transporter ATP-binding protein -0.40
    17 DZA65_RS11255 SDR family oxidoreductase -0.39
    18 DZA65_RS22575 amino acid ABC transporter permease -0.39
    19 DZA65_RS02360 winged helix-turn-helix transcriptional regulator -0.39
    20 DZA65_RS07320 DUF4868 domain-containing protein -0.39

    Or look for positive cofitness