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  • Negative cofitness for DZA65_RS04885 from Dickeya dianthicola ME23

    RNA-directed DNA polymerase
    SEED: Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS17145 polynucleotide adenylyltransferase PcnB -0.45
    2 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase -0.45
    3 DZA65_RS18310 HlyC/CorC family transporter -0.44
    4 DZA65_RS21995 universal stress protein UspA -0.40
    5 DZA65_RS13415 aliphatic sulfonates ABC transporter ATP-binding protein -0.39
    6 DZA65_RS17990 methionine ABC transporter ATP-binding protein MetN -0.39
    7 DZA65_RS10415 hypothetical protein -0.39
    8 DZA65_RS18485 glycoside hydrolase family 1 protein -0.39
    9 DZA65_RS08260 sensor domain-containing diguanylate cyclase -0.39
    10 DZA65_RS03760 fructuronate reductase -0.39
    11 DZA65_RS14205 hypothetical protein -0.38
    12 DZA65_RS21265 thioredoxin TrxA -0.37
    13 DZA65_RS09185 nuclear transport factor 2 family protein -0.36
    14 DZA65_RS09175 DUF1349 domain-containing protein -0.35
    15 DZA65_RS12890 penicillin acylase family protein -0.35
    16 DZA65_RS00405 alpha/beta hydrolase -0.35
    17 DZA65_RS16070 DUF4186 domain-containing protein -0.34
    18 DZA65_RS14225 LLM class flavin-dependent oxidoreductase -0.34
    19 DZA65_RS12335 D-amino acid dehydrogenase -0.34
    20 DZA65_RS01445 HTH-type transcriptional activator AaeR -0.33

    Or look for positive cofitness