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  • Negative cofitness for DZA65_RS03435 from Dickeya dianthicola ME23

    glycine cleavage system aminomethyltransferase GcvT
    SEED: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
    KEGG: aminomethyltransferase

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS00730 ribonuclease PH -0.43
    2 DZA65_RS00470 acyl-CoA dehydrogenase -0.42
    3 DZA65_RS21680 methyl-accepting chemotaxis protein -0.41
    4 DZA65_RS07665 AlpA family transcriptional regulator -0.40
    5 DZA65_RS00605 ABC transporter ATP-binding protein -0.38
    6 DZA65_RS17000 AEC family transporter -0.36
    7 DZA65_RS03365 SAM-dependent DNA methyltransferase -0.36
    8 DZA65_RS17230 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -0.35
    9 DZA65_RS17640 hypothetical protein -0.35
    10 DZA65_RS02175 DUF4102 domain-containing protein -0.34
    11 DZA65_RS13120 ribonuclease T -0.34
    12 DZA65_RS22950 hypothetical protein -0.34
    13 DZA65_RS04850 hypothetical protein -0.34
    14 DZA65_RS08775 flavin reductase family protein -0.34
    15 DZA65_RS18155 two-component sensor histidine kinase BarA -0.33
    16 DZA65_RS14440 kikA from plasmid origin -0.33
    17 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase -0.33
    18 DZA65_RS11610 Slp family lipoprotein -0.33
    19 DZA65_RS05945 YajQ family cyclic di-GMP-binding protein -0.33
    20 DZA65_RS02255 D-threitol dehydrogenase -0.33

    Or look for positive cofitness