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  • Negative cofitness for DZA65_RS02870 from Dickeya dianthicola ME23

    chorismate lyase
    SEED: Chorismate--pyruvate lyase (EC 4.1.3.40)
    KEGG: chorismate--pyruvate lyase

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS18845 ATP-binding protein -0.52
    2 DZA65_RS19795 nitrogen assimilation transcriptional regulator -0.44
    3 DZA65_RS15460 penicillin-insensitive murein endopeptidase -0.44
    4 DZA65_RS07605 P-type conjugative transfer protein VirB9 -0.43
    5 DZA65_RS13250 carbohydrate porin -0.43
    6 DZA65_RS13135 YnhF family membrane protein -0.43
    7 DZA65_RS14370 hypothetical protein -0.42
    8 DZA65_RS14640 helix-turn-helix transcriptional regulator -0.42
    9 DZA65_RS11880 two-component system response regulator PhoP -0.40
    10 DZA65_RS02905 LysR family transcriptional regulator -0.39
    11 DZA65_RS11150 ATP-dependent dethiobiotin synthetase BioD -0.39
    12 DZA65_RS15625 membrane protein YpdK -0.38
    13 DZA65_RS14285 excinuclease ABC subunit UvrC -0.38
    14 DZA65_RS20135 proline/glycine betaine ABC transporter permease -0.38
    15 DZA65_RS03450 HD domain-containing protein -0.38
    16 DZA65_RS07290 MFS transporter -0.38
    17 DZA65_RS15935 IS110 family transposase -0.38
    18 DZA65_RS18385 methyl-accepting chemotaxis protein -0.38
    19 DZA65_RS11330 phenolic acid decarboxylase -0.37
    20 DZA65_RS09075 ATP-dependent RNA helicase RhlE -0.37

    Or look for positive cofitness