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  • Negative cofitness for DZA65_RS01510 from Dickeya dianthicola ME23

    RNA polymerase factor sigma-54
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-54 factor

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 DZA65_RS16790 polysaccharide lyase -0.55
    2 DZA65_RS21115 class I adenylate cyclase -0.53
    3 DZA65_RS10760 DUF1315 family protein -0.52
    4 DZA65_RS09835 arginine ABC transporter permease ArtQ -0.52
    5 DZA65_RS03315 phosphopentomutase -0.51
    6 DZA65_RS01670 DnaA initiator-associating protein DiaA -0.51
    7 DZA65_RS07985 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase -0.51
    8 DZA65_RS18830 hypothetical protein -0.50
    9 DZA65_RS09595 amino acid permease -0.49
    10 DZA65_RS07065 dCTP deaminase -0.49
    11 DZA65_RS15260 sugar phosphatase -0.49
    12 DZA65_RS17790 amidohydrolase -0.47
    13 DZA65_RS07770 dicarboxylate/amino acid:cation symporter -0.47
    14 DZA65_RS09475 response regulator transcription factor -0.46
    15 DZA65_RS13605 purine nucleoside phosphoramidase -0.46
    16 DZA65_RS14820 formate dehydrogenase cytochrome b556 subunit -0.46
    17 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF -0.45
    18 DZA65_RS21080 DNA helicase II -0.45
    19 DZA65_RS21500 ATP-dependent protease subunit HslV -0.45
    20 DZA65_RS19670 FtsH protease activity modulator HflK -0.45

    Or look for positive cofitness