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  • Negative cofitness for Atu6176 from Agrobacterium fabrum C58

    component of type IV secretion system
    SEED: Inner membrane protein of type IV secretion of T-DNA complex, TonB-like, VirB10
    KEGG: type IV secretion system protein VirB10

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu6017 NAD/NADP octopine/nopaline dehydrogenase -0.41
    2 Atu1422 transcriptional regulator, MarR family -0.40
    3 Atu6018 arginase -0.40
    4 Atu6019 D-nopaline dehydrogenase -0.40
    5 Atu6021 D-nopaline dehydrogenase -0.40
    6 Atu3908 GntR family transcriptional regulator -0.37
    7 Atu6020 conserved hypothetical protein -0.36
    8 Atu6150 P-450 monooxygenase -0.36
    9 Atu1417 enoyl-CoA hydratase -0.35
    10 Atu6145 arabinose phosphate phosphatase -0.34
    11 Atu1419 transcriptional regulator, GntR family -0.34
    12 Atu2347 ABC transporter, nucleotide binding/ATPase protein (sugar) -0.34
    13 Atu6016 ornithine cyclodeaminase -0.33
    14 Atu1780 ATP-dependent DNA helicase -0.32
    15 Atu0161 biopolymer transport protein -0.31
    16 Atu6144 agrocinopine phosphodiesterase -0.31
    17 Atu4711 two component sensor kinase -0.31
    18 Atu3719 MutT/nudix family protein -0.31
    19 Atu8167 putative transmembrane protein -0.30
    20 Atu1251 O-acetylhomoserine sulfhydrylase -0.30

    Or look for positive cofitness