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  • Negative cofitness for Atu6175 from Agrobacterium fabrum C58

    component of type IV secretion system
    SEED: Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9
    KEGG: type IV secretion system protein VirB9

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu6019 D-nopaline dehydrogenase -0.48
    2 Atu6021 D-nopaline dehydrogenase -0.48
    3 Atu6018 arginase -0.46
    4 Atu6016 ornithine cyclodeaminase -0.45
    5 Atu6017 NAD/NADP octopine/nopaline dehydrogenase -0.45
    6 Atu1422 transcriptional regulator, MarR family -0.44
    7 Atu6020 conserved hypothetical protein -0.44
    8 Atu6150 P-450 monooxygenase -0.40
    9 Atu0161 biopolymer transport protein -0.40
    10 Atu1419 transcriptional regulator, GntR family -0.40
    11 Atu0163 tonB protein -0.38
    12 Atu6145 arabinose phosphate phosphatase -0.38
    13 Atu2347 ABC transporter, nucleotide binding/ATPase protein (sugar) -0.38
    14 Atu1251 O-acetylhomoserine sulfhydrylase -0.38
    15 Atu3908 GntR family transcriptional regulator -0.38
    16 Atu2346 ABC transporter, membrane spanning protein (sugar) -0.37
    17 Atu6144 agrocinopine phosphodiesterase -0.37
    18 Atu4055 endo-1,3-1,4-beta-glycanase -0.36
    19 Atu0162 biopolymer transport protein -0.36
    20 Atu4711 two component sensor kinase -0.36

    Or look for positive cofitness