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  • Negative cofitness for Atu6170 from Agrobacterium fabrum C58

    component of type IV secretion system
    SEED: ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB4
    KEGG: type IV secretion system protein VirB4

    Computing cofitness values with 1003 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu6019 D-nopaline dehydrogenase -0.69
    2 Atu6021 D-nopaline dehydrogenase -0.68
    3 Atu6017 NAD/NADP octopine/nopaline dehydrogenase -0.67
    4 Atu6020 conserved hypothetical protein -0.64
    5 Atu6018 arginase -0.64
    6 Atu6016 ornithine cyclodeaminase -0.63
    7 Atu1422 transcriptional regulator, MarR family -0.61
    8 Atu6144 agrocinopine phosphodiesterase -0.58
    9 Atu6150 P-450 monooxygenase -0.57
    10 Atu6145 arabinose phosphate phosphatase -0.56
    11 Atu2347 ABC transporter, nucleotide binding/ATPase protein (sugar) -0.54
    12 Atu4055 endo-1,3-1,4-beta-glycanase -0.53
    13 Atu2346 ABC transporter, membrane spanning protein (sugar) -0.52
    14 Atu1251 O-acetylhomoserine sulfhydrylase -0.50
    15 Atu1419 transcriptional regulator, GntR family -0.50
    16 Atu3719 MutT/nudix family protein -0.48
    17 Atu6141 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) -0.46
    18 Atu6047 conserved hypothetical protein -0.45
    19 Atu3908 GntR family transcriptional regulator -0.45
    20 Atu0161 biopolymer transport protein -0.44

    Or look for positive cofitness