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  • Negative cofitness for Atu6142 from Agrobacterium fabrum C58

    ABC transporter, membrane spanning protein (agrocinopine)
    SEED: permease protein
    KEGG: peptide/nickel transport system permease protein

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu6164 trans-zeatin secretion protein -0.50
    2 Atu4655 ROK family transcriptional regulator -0.46
    3 Atu6167 component of type IV secretion system -0.43
    4 Atu6170 component of type IV secretion system -0.39
    5 Atu6088 transcriptional regulator, LysR family -0.31
    6 Atu2349 hypothetical protein -0.31
    7 Atu5122 3-ketoacyl-ACP reductase -0.31
    8 Atu0825 quinone oxidoreductase -0.30
    9 Atu6168 component of type IV secretion system, pilin subunit -0.30
    10 Atu6174 component of type IV secretion system -0.29
    11 Atu6175 component of type IV secretion system -0.27
    12 Atu4176 hypothetical protein -0.24
    13 Atu1159 arginine-tRNA-protein transferase -0.24
    14 Atu3897 glycerol-3-phosphate dehydrogenase -0.23
    15 Atu6166 two component sensor kinase -0.23
    16 Atu1990 bacteriophytochrome protein -0.23
    17 Atu0085 tRNA pseudouridine 55 synthase -0.22
    18 Atu2348 sugar binding protein -0.22
    19 Atu3866 hypothetical protein -0.22
    20 Atu4199 TetR family transcriptional regulator -0.21

    Or look for positive cofitness