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  • Negative cofitness for Atu5490 from Agrobacterium fabrum C58

    ECF family RNA polymerase sigma factor
    SEED: ECF family sigma factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu1042 hypothetical protein -0.18
    2 Atu3670 siderophore biosynthesis protein -0.17
    3 Atu0171 ABC transporter, membrane spanning protein (phosphonate) -0.16
    4 Atu5165 type IV secretion protein AvhB4 -0.16
    5 Atu0575 flagellar hook associated protein -0.16
    6 Atu0577 FLAF protein -0.16
    7 Atu0551 flagellar protein FLGA precursor -0.16
    8 Atu3684 siderophore biosynthesis protein -0.15
    9 Atu2421 chitooligosaccharide deacetylase -0.15
    10 Atu3891 hypothetical protein -0.15
    11 Atu0571 chemotaxis MotD protein -0.15
    12 Atu0560 flagellar motor protein -0.15
    13 Atu0576 flagellar hook-associated protein -0.15
    14 Atu0574 flagellar hook protein -0.15
    15 Atu0562 flagellar motor switch protein FliN -0.15
    16 Atu6101 helicase, SNF2 family -0.15
    17 Atu2619 NAD-dependent formate dehydrogenase, C subunit protein -0.15
    18 Atu0549 hypothetical protein -0.15
    19 Atu0561 flagellar motor switch protein -0.15
    20 Atu3672 polyketide synthase -0.15

    Or look for positive cofitness