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  • Negative cofitness for Atu4746 from Agrobacterium fabrum C58

    sugar ABC transporter permease
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: simple sugar transport system permease protein

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu4872 LysR family transcriptional regulator -0.21
    2 Atu3028 hypothetical protein -0.21
    3 Atu4868 oxidoreductase -0.20
    4 Atu3037 dipeptide ABC transporter permease -0.20
    5 Atu3033 hypothetical protein -0.19
    6 Atu3024 sugar ABC transporter permease -0.19
    7 Atu4877 short-chain dehydrogenase -0.19
    8 Atu4862 IS21 family transposase -0.19
    9 Atu4879 hypothetical protein -0.18
    10 Atu4865 oxidoreductase -0.18
    11 Atu4870 NADP-dependent quinone oxidoreductase -0.18
    12 Atu4876 oxidoreductase -0.18
    13 Atu4864 MarR family transcriptional regulator -0.17
    14 Atu4873 TetR family transcriptional regulator -0.17
    15 Atu4874 hypothetical protein -0.17
    16 Atu3035 two component response regulator -0.16
    17 Atu3030 hypothetical protein -0.16
    18 Atu3023 sugar ABC transporter permease -0.16
    19 Atu3027 dehydrogenase -0.16
    20 Atu0566 hypothetical protein -0.16

    Or look for positive cofitness