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  • Negative cofitness for Atu4532 from Agrobacterium fabrum C58

    shikimate 5-dehydrogenase
    SEED: Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu6168 component of type IV secretion system, pilin subunit -0.26
    2 Atu0332 RNA polymerase sigma-54 factor -0.23
    3 Atu3866 hypothetical protein -0.20
    4 Atu1693 glutathione-regulated potassium-efflux system protein -0.20
    5 Atu6170 component of type IV secretion system -0.20
    6 Atu2743 hypothetical protein -0.19
    7 Atu1791 ABC transporter, membrane spanning protein (sugar) -0.19
    8 Atu3495 diguanylate cyclase -0.19
    9 Atu2783 acetyltransferase -0.19
    10 Atu6177 component of type IV secretion system -0.19
    11 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase -0.18
    12 Atu4194 oligopeptide ABC transporter permease -0.18
    13 Atu3135 ABC transporter permease -0.18
    14 Atu2747 hypothetical protein -0.18
    15 Atu2758 ammonium transporter -0.18
    16 Atu2742 hypothetical protein -0.18
    17 Atu2734 dehydrogenase -0.18
    18 Atu0856 transcriptional regulator, LysR family -0.18
    19 Atu3469 phosphoglyceromutase -0.17
    20 Atu4799 dTDP-4-dehydrorhamnose 3,5-epimerase -0.17

    Or look for positive cofitness