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  • Negative cofitness for Atu4258 from Agrobacterium fabrum C58

    oligopeptide ABC transporter permease
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system permease protein

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu1454 siroheme synthase -0.35
    2 Atu1455 hypothetical protein -0.34
    3 Atu2015 aminotransferase -0.34
    4 Atu3289 thiamine-phosphate pyrophosphorylase -0.33
    5 Atu3483 3-methyl-2-oxobutanoate hydroxymethyltransferase -0.33
    6 Atu3783 glutamate synthase subunit beta -0.33
    7 Atu2569 thiamine biosynthesis protein -0.33
    8 Atu1456 sulfite reductase (NADPH) hemoprotein beta-component -0.33
    9 Atu3784 glutamate synthase large subunit -0.33
    10 Atu4098 quinolinate synthetase -0.33
    11 Atu3482 pantoate--beta-alanine ligase -0.32
    12 Atu4096 nicotinate-nucleotide pyrophosphorylase -0.31
    13 Atu2790 3-isopropylmalate dehydratase, small subunit -0.31
    14 Atu3867 hypothetical protein -0.31
    15 Atu0405 long-chain-fatty-acid-CoA-ligase -0.31
    16 Atu2770 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis -0.31
    17 Atu2747 hypothetical protein -0.31
    18 Atu3794 FadR family transcriptional regulator -0.31
    19 Atu3997 biotin synthetase -0.31
    20 Atu3290 phosphomethylpyrimidine kinase -0.31

    Or look for positive cofitness