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  • Negative cofitness for Atu4194 from Agrobacterium fabrum C58

    oligopeptide ABC transporter permease
    SEED: Possible rhamnose ABC transporter, permease component 2
    KEGG: peptide/nickel transport system permease protein

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu4191 GntR family transcriptional regulator -0.28
    2 Atu3963 GntR family transcriptional regulator -0.23
    3 Atu3128 di-trans,poly-cis-decaprenylcistransferase -0.22
    4 Atu4190 calcium-binding protein, regucalcin -0.20
    5 Atu3224 ribose ABC transporter permease -0.20
    6 Atu4532 shikimate 5-dehydrogenase -0.18
    7 Atu4530 TetR family transcriptional regulator -0.18
    8 Atu4592 hypothetical protein -0.18
    9 Atu3115 TetR family transcriptional regulator -0.16
    10 Atu2112 soluble lytic transglycosylase -0.16
    11 Atu0545 flagella associated protein -0.15
    12 Atu3033 hypothetical protein -0.15
    13 Atu5523 ABC transporter membrane spanning protein (branched chain amino acid) -0.15
    14 Atu1529 nitrogen fixation protein FixH -0.15
    15 Atu1209 transcriptional regulator, LysR family -0.15
    16 Atu2419 transcriptional regulator, LuxR family -0.15
    17 Atu1129 excinuclease ABC chain C -0.14
    18 Atu2057 DNA helicase II -0.14
    19 Atu6011 tryptophan 2-monooxygenase -0.14
    20 Atu2034 transcriptional regulator, ArsR family -0.14

    Or look for positive cofitness