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  • Negative cofitness for Atu4160 from Agrobacterium fabrum C58

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 1003 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu6164 trans-zeatin secretion protein -0.37
    2 Atu6166 two component sensor kinase -0.33
    3 Atu6168 component of type IV secretion system, pilin subunit -0.32
    4 Atu6167 component of type IV secretion system -0.30
    5 Atu6170 component of type IV secretion system -0.28
    6 Atu4655 ROK family transcriptional regulator -0.27
    7 Atu6176 component of type IV secretion system -0.26
    8 Atu1990 bacteriophytochrome protein -0.26
    9 Atu6169 component of type IV secretion system -0.25
    10 Atu6174 component of type IV secretion system -0.25
    11 Atu6178 two component response regulator -0.24
    12 Atu2739 oxidoreductase -0.24
    13 Atu8083 hypothetical protein -0.24
    14 Atu1988 two component sensor kinase -0.23
    15 Atu8127 hypothetical protein -0.23
    16 Atu8125 hypothetical protein -0.23
    17 Atu3495 diguanylate cyclase -0.22
    18 Atu0436 hypothetical protein -0.22
    19 Atu0457 hypothetical protein -0.22
    20 Atu1693 glutathione-regulated potassium-efflux system protein -0.22

    Or look for positive cofitness