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  • Negative cofitness for Atu4030 from Agrobacterium fabrum C58

    sugar ABC transporter permease
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: simple sugar transport system permease protein

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu4323 ribitol 2-dehydrogenase -0.39
    2 Atu1902 transketolase -0.35
    3 Atu0978 two component response regulator -0.33
    4 Atu3544 arsenical pump membrane protein -0.33
    5 Atu0062 transcriptional regulator, ROK family -0.32
    6 Atu0979 two component sensor kinase -0.31
    7 Atu2811 hypothetical protein -0.31
    8 Atu2821 transcriptional regulator, GntR family -0.30
    9 Atu3878 transcriptional regulator -0.30
    10 Atu1904 transcriptional regulator -0.30
    11 Atu2685 aconitate hydratase -0.27
    12 Atu3532 GntR family transcriptional regulator -0.27
    13 Atu1327 NADH-ubiquinone oxidoreductase -0.27
    14 Atu0153 transcriptional regulator, Fur family -0.27
    15 Atu1644 hypothetical protein -0.26
    16 Atu8095 hypothetical protein -0.26
    17 Atu2379 phosphomannomutase -0.26
    18 Atu1646 ABC transporter, nucleotide binding/ATPase protein -0.26
    19 Atu2183 lipopolysaccharide core biosynthesis mannosyltransferase -0.26
    20 Atu0143 MFS permease -0.26

    Or look for positive cofitness