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  • Negative cofitness for Atu3969 from Agrobacterium fabrum C58

    sugar ABC transporter permease
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: multiple sugar transport system permease protein

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu4685 LacI family transcriptional regulator -0.28
    2 Atu4624 GntR family transcriptional regulator -0.25
    3 Atu3461 GntR family transcriptional regulator -0.25
    4 Atu3140 5-dehydro-4-deoxyglucarate dehydratase -0.20
    5 Atu4237 hypothetical protein -0.17
    6 Atu2753 ATP-dependent helicase -0.16
    7 Atu3251 haloacid dehalogenase -0.16
    8 Atu3640 hypothetical protein -0.14
    9 Atu0109 transcriptional regulator, MarR family -0.14
    10 Atu2179 GGDEF family protein -0.14
    11 Atu5121 two component response regulator -0.14
    12 Atu0093 Recombination protein -0.13
    13 Atu3591 short chain dehydrogenase -0.13
    14 Atu1837 transcriptional regulator -0.13
    15 Atu3656 acetyltransferase -0.13
    16 Atu0187 ABC transporter, substrate binding protein (peptide) -0.13
    17 Atu0941 hypothetical protein -0.13
    18 Atu1888 two component sensor kinase -0.13
    19 Atu1834 mutT like protein -0.13
    20 Atu3661 hypothetical protein -0.13

    Or look for positive cofitness