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  • Negative cofitness for Atu3968 from Agrobacterium fabrum C58

    sugar ABC transporter permease
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: multiple sugar transport system permease protein

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu4624 GntR family transcriptional regulator -0.32
    2 Atu4685 LacI family transcriptional regulator -0.32
    3 Atu3461 GntR family transcriptional regulator -0.30
    4 Atu2753 ATP-dependent helicase -0.21
    5 Atu0109 transcriptional regulator, MarR family -0.21
    6 Atu4237 hypothetical protein -0.19
    7 Atu3140 5-dehydro-4-deoxyglucarate dehydratase -0.18
    8 Atu5042 recombinase -0.16
    9 Atu3792 L-asparagine permease -0.16
    10 Atu3545 hypothetical protein -0.15
    11 Atu5121 two component response regulator -0.14
    12 Atu4694 chlorohydrolase -0.13
    13 Atu5434 hypothetical protein -0.13
    14 Atu1444 nitrogen regulation protein -0.13
    15 Atu2020 transcriptional regulator, TetR family -0.13
    16 Atu4113 dipeptide ABC transporter substrate-binding protein -0.12
    17 Atu3011 ArsR family transcriptional regulator -0.12
    18 Atu0820 ABC transporter, substrate binding protein (sulfate) -0.12
    19 Atu6055 transcriptional regulator, LysR family -0.12
    20 Atu5196 hypothetical protein -0.12

    Or look for positive cofitness