• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for Atu1982 from Agrobacterium fabrum C58

    sigma factor
    SEED: RNA polymerase sigma-70 factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 1003 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu3496 hypothetical protein -0.20
    2 Atu3512 competence protein F -0.18
    3 Atu5533 ABC transporter membrane spanning protein -0.17
    4 Atu0217 components of type IV pilus -0.17
    5 Atu3770 5'-nucleotidase -0.17
    6 Atu0701 GGDEF family protein -0.17
    7 Atu1784 hypothetical protein -0.17
    8 Atu0130 cytidine deaminase -0.17
    9 Atu3495 diguanylate cyclase -0.16
    10 Atu0228 hypothetical protein -0.16
    11 Atu0524 transcriptional regulator, LuxR family -0.16
    12 Atu4726 superoxide dismutase -0.16
    13 Atu3207 diguanylate cyclase -0.15
    14 Atu3303 cellulose synthesis protein -0.15
    15 Atu1357 hypothetical protein -0.14
    16 Atu3153 AraC family transcriptional regulator -0.14
    17 Atu2402 urease accessory protein -0.14
    18 Atu6129 conjugal transfer protein -0.14
    19 Atu4307 hypothetical protein -0.14
    20 Atu0759 hypothetical protein -0.14

    Or look for positive cofitness