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  • Negative cofitness for Atu0368 from Agrobacterium fabrum C58

    tRNA pseudouridine synthase I
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase A

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu3614 glyoxalase II -0.62
    2 Atu3833 hypothetical protein -0.36
    3 Atu3672 polyketide synthase -0.35
    4 Atu0214 leucine aminopeptidase -0.35
    5 Atu1768 hypothetical protein -0.34
    6 Atu3670 siderophore biosynthesis protein -0.34
    7 Atu4033 sugar ABC transporter substrate-binding protein -0.33
    8 Atu5418 opine/octopine dehydrogenase -0.32
    9 Atu4035 two component response regulator -0.32
    10 Atu0079 Atu0079-1 mutant of pfkB family carbohydrate kinase -0.32
    11 Atu2659 MFS permease -0.32
    12 Atu4034 two component sensor kinase -0.32
    13 Atu3578 glycerol-3-phosphate dehydrogenase -0.31
    14 Atu2743 hypothetical protein -0.29
    15 Atu3683 peptide synthetase, siderophore biosynthesis protein -0.28
    16 Atu1547 magnesium transport protein -0.28
    17 Atu3682 non-ribosomal peptide synthetase, siderophore biosynthesis protein -0.28
    18 Atu2705 ABC transporter, nucleotide binding/ATPase protein (protein) -0.28
    19 Atu0128 ABC transporter, membrane spanning protein (sugar/ribonucleotide) -0.27
    20 Atu3977 ice nucleation-like protein -0.27

    Or look for positive cofitness