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  • Negative cofitness for Atu0332 from Agrobacterium fabrum C58

    RNA polymerase sigma-54 factor
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-54 factor

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu6131 TraR Antiactivator -0.49
    2 Atu6138 Repressor of the acc and arc operons -0.47
    3 Atu5075 GntR family transcriptional regulator -0.41
    4 Atu3480 hydroxymethylglutaryl-CoA lyase -0.34
    5 Atu1906 ABC transporter, membrane spanning protein -0.32
    6 Atu2526 hypothetical protein -0.32
    7 Atu6011 tryptophan 2-monooxygenase -0.30
    8 Atu3593 hypothetical protein -0.30
    9 Atu5123 acetolactate synthase catalytic subunit -0.30
    10 Atu5464 IclR family transcriptional regulator -0.30
    11 Atu1977 amine oxidase, flavin-containing -0.30
    12 Atu1356 hypothetical protein -0.30
    13 Atu4446 hypothetical protein -0.29
    14 Atu2278 transcriptional regulator, ArsR family -0.28
    15 Atu1830 bacterioferritin comigratory protein -0.28
    16 Atu0780 hypothetical protein -0.28
    17 Atu4099 hypothetical protein -0.28
    18 Atu1739 permease -0.28
    19 Atu4120 mandelate racemase -0.28
    20 Atu0331 sigma-54 modulation protein -0.28

    Or look for positive cofitness