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  • Negative cofitness for Atu0114 from Agrobacterium fabrum C58

    two component response regulator
    SEED: Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu4724 hypothetical protein -0.24
    2 Atu0415 hypothetical protein -0.22
    3 Atu1027 methyl-accepting chemotaxis protein -0.22
    4 Atu8116 hypothetical protein -0.22
    5 Atu3567 hypothetical protein -0.22
    6 Atu1417 enoyl-CoA hydratase -0.22
    7 Atu3908 GntR family transcriptional regulator -0.21
    8 Atu4730 hypothetical protein -0.21
    9 Atu2586 ABC transporter, nucleotide binding/ATPase protein (oligopeptide) -0.21
    10 Atu6047 conserved hypothetical protein -0.20
    11 Atu0769 protoheme IX farnesyltransferase -0.20
    12 Atu0940 PemK protein -0.20
    13 Atu4711 two component sensor kinase -0.19
    14 Atu2532 transcriptional regulator, MarR family -0.19
    15 Atu2587 ABC transporter, substrate binding protein (oligopeptide) -0.19
    16 Atu1803 cold shock protein -0.18
    17 Atu1074 NAD/NADP dependent oxidoreductase -0.18
    18 Atu3320 fibrinogen binding protein -0.18
    19 Atu0537 histidinol dehydrogenase -0.18
    20 Atu5073 pyridoxal phosphate biosynthesis protein -0.18

    Or look for positive cofitness