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  • Negative cofitness for Atu0085 from Agrobacterium fabrum C58

    tRNA pseudouridine 55 synthase
    SEED: tRNA pseudouridine synthase B (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase B

    Computing cofitness values with 1014 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Atu6139 ABC transporter, substrate binding protein (agrocinopines A and B) -0.27
    2 Atu6140 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) -0.26
    3 Atu1157 hypothetical protein -0.26
    4 Atu4856 nucleotidyltransferase -0.25
    5 Atu4669 hypothetical protein -0.24
    6 Atu0694 inositol monophosphatase family protein -0.24
    7 Atu6143 ABC transporter, membrane spanning protein (agrocinopine) -0.24
    8 Atu3793 aspartate ammonia-lyase -0.23
    9 Atu6142 ABC transporter, membrane spanning protein (agrocinopine) -0.22
    10 Atu3043 hydantoinase beta subunit-like protein -0.22
    11 Atu4855 conjugation protein -0.22
    12 Atu2551 RND multidrug efflux transporter -0.22
    13 Atu0972 lipA protein -0.22
    14 Atu8147 hypothetical protein -0.22
    15 Atu1792 ABC transporter, nucleotide binding/ATPase protein (sugar) -0.22
    16 Atu4852 hypothetical protein -0.22
    17 Atu2550 RND multidrug efflux membrane permease -0.21
    18 Atu2710 hypothetical protein -0.21
    19 Atu6144 agrocinopine phosphodiesterase -0.21
    20 Atu3029 glucarate dehydratase -0.21

    Or look for positive cofitness