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  • Top cofit genes for RPSI07_RS17025 from Ralstonia solanacearum PSI07

    RNA methyltransferase
    SEED: 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)
    KEGG: RNA methyltransferase, TrmH family

    Rank Hit Name Description Conserved? Cofitness  
    1 RPSI07_RS24120 hypothetical protein no 0.54
    2 RPSI07_RS08250 HU family DNA-binding protein no 0.52
    3 RPSI07_RS25155 hypothetical protein no 0.52
    4 RPSI07_RS19065 S-adenosylmethionine-dependent methyltransferase 0.62 0.51
    5 RPSI07_RS05455 MurR/RpiR family transcriptional regulator 0.54 0.50
    6 RPSI07_RS12555 hypothetical protein no 0.49
    7 RPSI07_RS18425 MOSC domain-containing protein no 0.49
    8 RPSI07_RS13055 DUF87 domain-containing protein no 0.48
    9 RPSI07_RS13980 hypothetical protein no 0.47
    10 RPSI07_RS24465 hypothetical protein no 0.47
    11 RPSI07_RS24695 hypothetical protein no 0.47
    12 RPSI07_RS09405 MarR family transcriptional regulator no 0.47
    13 RPSI07_RS20070 FKBP-type peptidyl-prolyl cis-trans isomerase no 0.46
    14 RPSI07_RS01895 CusA/CzcA family heavy metal efflux RND transporter 0.20 0.46
    15 RPSI07_RS04165 cupin domain-containing protein no 0.46
    16 RPSI07_RS11305 monofunctional biosynthetic peptidoglycan transglycosylase no 0.46
    17 RPSI07_RS01080 DUF3320 domain-containing protein no 0.46
    18 RPSI07_RS22890 DUF1289 domain-containing protein no 0.45
    19 RPSI07_RS25000 hypothetical protein no 0.45
    20 RPSI07_RS23325 GYD domain-containing protein no 0.45

    Or look for negative cofitness