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  • Top cofit genes for QEN71_RS38360 from Paraburkholderia sabiae LMG 24235

    transcriptional regulator NanR
    SEED: Transcriptional regulator NanR

    Rank Hit Name Description Conserved? Cofitness  
    1 QEN71_RS07270 LacI family DNA-binding transcriptional regulator 0.26 0.75
    2 QEN71_RS35850 LacI family DNA-binding transcriptional regulator no 0.66
    3 QEN71_RS02600 carbohydrate ABC transporter permease no 0.65
    4 QEN71_RS02595 sugar ABC transporter permease no 0.63
    5 QEN71_RS03220 tRNA (guanosine(46)-N7)-methyltransferase TrmB no 0.63
    6 QEN71_RS05740 phasin family protein no 0.63
    7 QEN71_RS05080 MurR/RpiR family transcriptional regulator 0.35 0.62
    8 QEN71_RS02585 L-iditol 2-dehydrogenase no 0.62
    9 QEN71_RS02590 sugar ABC transporter substrate-binding protein no 0.62
    10 QEN71_RS22200 acetyl-CoA C-acetyltransferase 0.36 0.61
    11 QEN71_RS17880 TIGR00730 family Rossman fold protein no 0.61
    12 QEN71_RS24545 polyhydroxyalkanoate depolymerase no 0.60
    13 QEN71_RS00545 LacI family DNA-binding transcriptional regulator 0.35 0.60
    14 QEN71_RS05205 CBS domain-containing protein no 0.59
    15 QEN71_RS08350 hybrid-cluster NAD(P)-dependent oxidoreductase no 0.59
    16 QEN71_RS16805 FadR/GntR family transcriptional regulator no 0.58
    17 QEN71_RS37555 response regulator 0.21 0.57
    18 QEN71_RS04915 aldose epimerase no 0.57
    19 QEN71_RS02610 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC no 0.57
    20 QEN71_RS22650 tRNA dihydrouridine(20/20a) synthase DusA no 0.57

    Or look for negative cofitness