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  • Top cofit genes for QEN71_RS03335 from Paraburkholderia sabiae LMG 24235

    ABC transporter substrate-binding protein
    SEED: ABC-type sugar transport system, periplasmic component
    KEGG: multiple sugar transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 QEN71_RS03350 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC 0.99 0.98
    2 QEN71_RS03345 carbohydrate ABC transporter permease 0.99 0.98
    3 QEN71_RS03340 sugar ABC transporter permease 0.99 0.96
    4 QEN71_RS03325 6-phosphogluconolactonase no 0.76
    5 QEN71_RS03330 glucose-6-phosphate dehydrogenase 0.93 0.73
    6 QEN71_RS24595 transaldolase 0.69 0.66
    7 QEN71_RS26920 phosphogluconate dehydratase 0.76 0.66
    8 QEN71_RS05740 phasin family protein no 0.64
    9 QEN71_RS12345 PadR family transcriptional regulator no 0.61
    10 QEN71_RS35810 CaiB/BaiF CoA-transferase family protein no 0.58
    11 QEN71_RS00870 ATP-binding protein no 0.55
    12 QEN71_RS00520 LysE family transporter no 0.51
    13 QEN71_RS29060 Cof-type HAD-IIB family hydrolase no 0.48
    14 QEN71_RS23045 cell division protein ZapE 0.48 0.47
    15 QEN71_RS24545 polyhydroxyalkanoate depolymerase no 0.46
    16 QEN71_RS03320 bifunctional transcriptional regulator/glucokinase 0.76 0.46
    17 QEN71_RS22205 class I poly(R)-hydroxyalkanoic acid synthase 0.64 0.46
    18 QEN71_RS41115 DUF2130 domain-containing protein no 0.44
    19 QEN71_RS18865 CinA family protein no 0.43
    20 QEN71_RS08145 OsmC family protein no 0.43

    Or look for negative cofitness