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Cofit
Protein
Homologs
Top cofit genes for Psyr_4219 from
Pseudomonas syringae pv. syringae B728a ΔmexB
GAF
SEED: GAF domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_2138
Glycosyl transferase, family 2
no
0.54
2
Psyr
_0849
CDP-diacylglycerol--serine O-phosphatidyltransferase
no
0.46
3
Psyr
_3455
Flagellar assembly protein FliH
no
0.46
4
Psyr
_3461
Helix-turn-helix, Fis-type
no
0.45
5
Psyr
_4374
conserved hypothetical protein
0.33
0.45
6
Psyr
_2050
ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA
no
0.45
7
Psyr
_4397
conserved hypothetical protein
no
0.45
8
Psyr
_3449
Flagellar hook-length control protein
no
0.44
9
Psyr
_0611
ABC transporter
no
0.43
10
Psyr
_1263
ATPase
no
0.43
11
Psyr
_5013
L-carnitine dehydratase/bile acid-inducible protein F
no
0.43
12
Psyr
_3437
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
no
0.43
13
Psyr
_0719
type IV pilus-associated protein, putative
no
0.42
14
Psyr
_3463
Flagellar protein FliS
no
0.42
15
Psyr
_1833
amino acid ABC transporter substrate-binding protein, PAAT family
no
0.41
16
Psyr
_0717
type IV pilus assembly protein PilW
no
0.41
17
Psyr
_0093
Flavoprotein monooxygenase
no
0.41
18
Psyr
_0840
Pentapeptide repeat protein
no
0.41
19
Psyr
_0589
protein of unknown function DUF403:Protein of unknown function DUF404:Protein of unknown function DUF407
no
0.40
20
Psyr
_0244
extracellular solute-binding protein, family 1
no
0.40
Or look for
negative cofitness