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Cofit
Protein
Homologs
Top cofit genes for Psyr_4153 from
Pseudomonas syringae pv. syringae B728a ΔmexB
conserved hypothetical protein
SEED: FOG: TPR repeat
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_2400
Binding-protein-dependent transport systems inner membrane component
no
0.57
2
Psyr
_1049
Short-chain dehydrogenase/reductase SDR
no
0.57
3
Psyr
_4447
hypothetical protein
no
0.53
4
Psyr
_3815
hypothetical protein
no
0.52
5
Psyr
_3708
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal
0.23
0.51
6
Psyr
_1209
type III secretion protein HrcQb
no
0.50
7
Psyr
_2877
monosaccharide ABC transporter substrate-binding protein, CUT2 family
no
0.49
8
Psyr
_4769
Major facilitator superfamily
no
0.48
9
Psyr
_3139
conserved hypothetical protein
no
0.48
10
Psyr
_4805
YD repeat protein
no
0.48
11
Psyr
_4484
hypothetical protein
no
0.47
12
Psyr
_4573
Histidine triad (HIT) protein
no
0.47
13
Psyr
_1195
type III secretion apparatus lipoprotein, YscJ/HrcJ family
no
0.47
14
Psyr
_2099
assimilatory nitrate reductase (NADH) alpha subunit apoprotein
no
0.45
15
Psyr
_3457
Flagellar FliF M-ring protein
no
0.45
16
Psyr
_0671
nucleoside ABC transporter membrane protein
no
0.45
17
Psyr
_1419
preQ(0) biosynthesis protein QueC
0.23
0.44
18
Psyr
_2906
Pilus retraction protein PilT
no
0.44
19
Psyr
_2035
conserved domain protein
no
0.44
20
Psyr
_2256
ABC transporter
no
0.44
Or look for
negative cofitness