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  • Top cofit genes for Psyr_3800 from Pseudomonas syringae pv. syringae B728a ΔmexB

    Major facilitator superfamily
    SEED: L-Proline/Glycine betaine transporter ProP
    KEGG: MFS transporter, DHA1 family, purine ribonucleoside efflux pump

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1249 histidyl-tRNA synthetase no 0.57
    2 Psyr_2980 UDP-glucose pyrophosphorylase 0.64 0.54
    3 Psyr_0916 GDP-mannose 4,6-dehydratase no 0.53
    4 Psyr_3637 Glycosyl transferase, family 4 no 0.53
    5 Psyr_2524 conserved hypothetical protein no 0.52
    6 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) no 0.52
    7 Psyr_0320 Protein of unknown function UPF0149 no 0.51
    8 Psyr_0626 DedA 0.51 0.51
    9 Psyr_0059 HemY, N-terminal:HemY, N-terminal:HemY, N-terminal no 0.51
    10 Psyr_3659 transcriptional regulator, BolA protein family 0.49 0.50
    11 Psyr_0570 DNA mismatch repair protein MutL no 0.50
    12 Psyr_3636 Polysaccharide biosynthesis protein CapD no 0.50
    13 Psyr_3014 protoporphyrin IX magnesium-chelatase no 0.49
    14 Psyr_0726 ribosomal large subunit pseudouridine synthase D 0.65 0.49
    15 Psyr_2533 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 0.57 0.48
    16 Psyr_3430 Cobyrinic acid a,c-diamide synthase 0.24 0.48
    17 Psyr_1317 conserved hypothetical protein no 0.47
    18 Psyr_3744 Protein of unknown function DUF214 no 0.47
    19 Psyr_4429 ABC transporter no 0.47
    20 Psyr_0966 Conserved hypothetical protein YfcH 0.49 0.46

    Or look for negative cofitness