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Cofit
Top cofit genes for Psyr_3080 from
Pseudomonas syringae pv. syringae B728a ΔmexB
CDS
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_4715
Sarcosine oxidase, alpha subunit, heterotetrameric
no
0.47
2
Psyr
_0113
conserved hypothetical protein
no
0.44
3
Psyr
_4813
Short-chain dehydrogenase/reductase SDR
no
0.42
4
Psyr
_1119
Helix-turn-helix protein RpiR:Sugar isomerase (SIS)
no
0.41
5
Psyr
_1030
bacteriophage N4 adsorption protein B
no
0.41
6
Psyr
_0456
Cytochrome B561, bacterial
no
0.41
7
Psyr
_0499
Urea amidolyase-related protein
no
0.41
8
Psyr
_4496
outer membrane transport energization protein TonB
no
0.40
9
Psyr
_3314
conserved hypothetical protein
no
0.40
10
Psyr
_0742
Enoyl-CoA hydratase/isomerase
no
0.40
11
Psyr
_2503
amino acid ABC transporter substrate-binding protein, PAAT family
no
0.39
12
Psyr
_3544
putative integral membrane protein
no
0.39
13
Psyr
_4791
D-erythrose-4-phosphate dehydrogenase
no
0.38
14
Psyr
_3117
lipoprotein, putative
no
0.38
15
Psyr
_0947
TPR repeat protein:TPR repeat protein
no
0.38
16
Psyr
_0832
Two-component sensor kinase CbrA
no
0.38
17
Psyr
_2954
Phospholipase/Carboxylesterase
no
0.38
18
Psyr
_2733
Short-chain dehydrogenase/reductase SDR
no
0.37
19
Psyr
_1148
branched chain amino acid aminotransferase apoenzyme
no
0.37
20
Psyr
_3268
myo-inositol 2-dehydrogenase
no
0.37
Or look for
negative cofitness