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Gene
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Cofit
Protein
Homologs
Top cofit genes for Psyr_2700 from
Pseudomonas syringae pv. syringae B728a ΔmexB
PAS
SEED: Signal transduction histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_0692
Binding-protein-dependent transport systems inner membrane component
no
0.50
2
Psyr
_1935
Protein of unknown function DUF796
no
0.45
3
Psyr
_2837
hypothetical protein
0.33
0.44
4
Psyr
_2842
hypothetical protein
0.33
0.43
5
Psyr
_1323
Extensin-like, C-terminal
no
0.43
6
Psyr
_1294
regulatory protein, LuxR:Response regulator receiver
no
0.43
7
Psyr
_4772
Protein of unknown function DUF519
no
0.43
8
Psyr
_1829
conserved hypothetical protein
no
0.42
9
Psyr
_0475
Protein of unknown function YGGT
no
0.41
10
Psyr
_2768
tail fiber assembly domain protein
no
0.41
11
Psyr
_2683
arginine:ornithine antiporter, APA family
no
0.40
12
Psyr
_0691
gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03
no
0.40
13
Psyr
_2473
transcriptional regulator, LysR family
no
0.40
14
Psyr
_2797
hypothetical protein
no
0.40
15
Psyr
_2659
Protein of unknown function DUF955
no
0.40
16
Psyr
_2991
GCN5-related N-acetyltransferase
no
0.39
17
Psyr
_3004
transcriptional regulator, LysR family
no
0.39
18
Psyr
_2651
conserved hypothetical protein
0.32
0.39
19
Psyr
_0620
Outer membrane autotransporter barrel
no
0.39
20
Psyr
_1877
EthD
no
0.39
Or look for
negative cofitness