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Cofit
Protein
Homologs
Top cofit genes for Psyr_2260 from
Pseudomonas syringae pv. syringae B728a ΔmexB
Amidase
SEED: putative amidase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3276
membrane protein, putative
no
0.56
2
Psyr
_0860
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer
no
0.55
3
Psyr
_3798
conserved domain protein
no
0.53
4
Psyr
_4909
gamma-aminobutyrate:proton symporter, AAT family
0.24
0.51
5
Psyr
_2622
Acriflavin resistance protein
no
0.47
6
Psyr
_3753
Short-chain dehydrogenase/reductase SDR
0.25
0.46
7
Psyr
_0778
type III effector HopAG1
no
0.45
8
Psyr
_3244
Phospholipase D/Transphosphatidylase
no
0.45
9
Psyr
_2938
transcriptional regulator, LysR family
no
0.44
10
Psyr
_3566
transcriptional regulator, AraC family
no
0.44
11
Psyr
_1915
Peptidase M20:Peptidase M20
no
0.44
12
Psyr
_4261
conserved hypothetical protein
no
0.44
13
Psyr
_2079
phosphoserine phosphatase / phosphoserine:homoserine phosphotransferase
no
0.43
14
Psyr
_3315
conserved hypothetical protein
no
0.43
15
Psyr
_1512
prepilin
no
0.42
16
Psyr
_4663
hypothetical protein
no
0.42
17
Psyr
_3926
transcriptional regulator, PadR family
no
0.42
18
Psyr
_0650
Protein of unknown function RIO1
no
0.42
19
Psyr
_1449
hypothetical protein
no
0.41
20
Psyr
_3632
conserved hypothetical protein
no
0.41
Or look for
negative cofitness